Monday, 28 September 2009

Enabling Open Scholarship for 'big science'

Enabling Open Scholarship (EOS) launched on September 23rd 2009

Here is notice of an important landmark development. The statement from the launch announcement says:

“As we rapidly approach 100 formal, mandatory, policies on Open Access from universities, research institutes and research funders a group of senior directors of universities and research institutes have come together to launch a new forum for the promotion of the principles and practices of open scholarship.

The aim of Enabling Open Scholarship (EOS) is to further the opening up of scholarship and research that we are now seeing as a natural part of ‘big science’ and through the growing interest from the research community in open access, open education, open science and open innovation. These, and other, 'open' approaches to scholarship are changing the way research and learning is done and will be performed in the future.

Enabling Open Scholarship (EOS) provides the higher education and research sectors around the world with information on developments and with advice and guidance on implementing policies and processes that encourage the opening up of scholarship. It also provides a forum for discussion and debate amongst its members and will be taking that discussion into the wider community.”

For more, see and the EOS Home page at home

Open Scholarship – Open Science – Open Source – Open Access – it is remarkable how the approach to sharing and using research data has changed from what was considered a way-out concept to becoming established practice. EOS is a response to formalizing and advancing what is now our way of working and its launch marks an important stage in global research development.

Thursday, 17 September 2009

eIFL countries continue to make impressive OA progress!


Thanks to eIFL, we learn that 26 rectors of universities in the Ukraine endorsed the Olvia Declaration that includes academic freedom, university autonomy and the role of science and education for sustainable development.

Academic freedom includes open access to research information through the development of open repositories and open access journals, enabling the free communication of researchers in the Ukraine with peers around the world.
In Article 2.11 of the Action Plan on implementing the Olvia declaration, it is stated:
“To practice open access to knowledge Universities and research organizations should:
• develop institutional polices and strategies on open access (free and unrestricted access to full text peer reviewed research results), provide access to, search and usage of the above mentioned works by the faculty to every internet user to increase scientific, social and economic impact of the research;
• launch and develop open institutional repositories and open access journals;
• encourage open use of this information for research and education.”

This follows on from the Belgorod Declaration to stimulate and support open access to scientific knowledge and cultural heritage endorsed by 10 rectors of universities of the CIS countries in May 2009, as reported in this blog on July 10th.

eIFL and its partner colleagues in the Ukraine are greatly to be congratulated for achieving this important step towards global research communication.

Photo from eIFL newsletter, with thanks.

Tuesday, 18 August 2009

High usage of Institutional Repository content – but can we believe the statistics?

The full text down-load statistics now being made available from a growing number of open access Institutional Repositories (IRs) are showing very high levels of usage by researchers around the world, developing countries being within the top user-countries. But some have criticized these figures, fearing that the usual problems with web statistics are showing higher levels of usage than is the reality.

Troubles that can occur when attempting to analyse web statistics include accessions by web crawlers, crawlers or other access processes becoming ‘stuck’, intranet usage that may be of local relevance, or occasional individual authors downloading their own publications for distribution, teaching or other purposes. These records of ‘usage’ would not reflect global professional interest in articles.

As criticism of web statistics as ‘worse than useless’ has been made, it seemed important to check with some of the experienced managers of established IRs what actions are taken, if any, to minimize spurious downloads. Are the usage statistics they record of full text downloads reliable? Are steps taken to remove machine-generated accessions? Here are the answers they provided:

- "Yes, we “clean” our download statistics to exclude crawlers, agents and other “anomalous” situations. We do it in two complementary ways:
Automatic exclusion of downloads originated by “well behaved” crawlers and/or by crawlers already identified as such in our database of agents and crawlers;
We automatically generate an “observation list” of “suspicious” behavior from particular IP addresses. Every month we check that list, and 3 things can happen: 1 – We conclude it’s a crawler and the IP is added to the crawler database and the downloads are removed from the statistics; 2 – We conclude it’s not a crawler and the IP is removed from the suspicious list; 3- We can’t get a conclusion and the IP remains for another month on the observation list".


- “We had to specifically exclude a lot of crawlers, as they occasionally clobbered up the eprintstats database that we use. That is the main reason that our usage stats dipped at the start of this year. I don't think that repeat downloads are a big problem - those from the local Intranet are identified anyway. I do recall that one obscure paper was top of the charts one month, which turned out to be due to a crawler getting stuck on it, so I removed its stats.”

- “I think the figures for downloads are more reliable than those for abstract views. There is bound to be some crawler usage in our stats, but I think we have done what we can to minimise them and so I don't think the stats give a distorted picture. I agree that you do need to be cautious when quoting web usage stats.”

- “As a rule of thumb, about 50% of repository downloads are attributable to non-human clicking. Our IRStats makes efforts to filter these out. For a start, we maintain a list of addresses of the major, known crawlers. We also ignore sites that download "too much". And finally we discount multiple downloads of the same item from the same browser within a particular period. . . . I think that (to our best efforts) you don't need to adjust the figures at all from IRStats. What we can't tell you is whether the downloads represent "genuine scholars", "commercial researchers", "members of the public", "students" or "mistaken downloads".”


- “The visits to the IRs by the numerous crawlers are taken into consideration by the software that [is] used for generating the statistics. [But even if] such visits [are] taken care of, a small percentage (< 5%) could still creep in as new crawlers keep emerging on a regular basis. Some software have the feature of not considering the visits/downloads from the Intranet. This has to be done at the software configuration level. In our case, I'm yet to implement this feature. In my opinion, the visit/downloads from the Intranet could be up to 10%. Both the figures given above are rough estimates based on my judgement.”

It can be taken, judging from these comments from IR managers (using both eprints and dspace software), that the major ‘web-stats problems’ are taken care of and that the figures recorded for usage reflect as near as possible genuine usage. However, while the statistics tables can therefore be a reliable measure of the growing volume of research information being down-loaded daily, the following provisos remain:

- there will always be small levels of uncertainties in interpretations because of the fluid nature of the web;
- not all IRs may be as assiduous as those contacted here in ‘cleaning up’ their statistics reports, and newly established IRs may still be incorporating checking procedures;
- comparisons of usage recorded by different IRs may be difficult because of differences in configuration or management procedures. However, usage of a single site over different time periods remains a valid measurement of growth in usage of a site;
- as one of the IR managers stated, it is still not possible to identify the precise usage to which downloads will be put, and it may be that this can never be established, given the increasingly diverse ways in which the research community can now exchange information. However, it is common sense to assume that a user is unlikely to take the time to download technical articles (and in the case of developing countries to suffer the irritations and costs of low bandwidth) unless there is a genuine professional interest in an article as a way to enhance the user’s own research. There is also now good evidence to show that downloads lead to citations, and a recent paper from Cornell University analyses different mechanisms now available for measuring research impact.
- while usage figures supplied by IRs are a strong measure of the value of IR content to research, there is a need for standardisation that will make it possible for downloads from different IRs using different software to be compared. The projects known as COUNTER and PIRUS are two JISC-supported projects designed to address this, and include input from IRs (lead by Paul Needham from Cranfield Institute in the UK).

It is important that proponents of IRs ensure that the research communities understand that statistics of downloads from IRs are a reliable measurement and are different from those that may be quoted from informal and non-professional web sites. The limitations are well understood by IR managers and steps are taken to remove them as far as possible. The wider communities need to know that IR statistics are professionally managed and reflect reality within the limits that current technical methodology allows.

Since it is the mission of the EPT to promote the bi-directional exchange of research information, the reliability of usage statistics from IRs is essential if they are to be quoted as evidence of the value placed on these resources by the global research community. The comments provided by these managers of established IRs provide reassurance that they are reliable and can be quoted with confidence.

The following web sites provide examples of some of the IR statistics pages showing usage by country. From these it can be seen that usage by developing countries from IRs located both in the developed and emerging countries is high.

- University of Strathclyde, UK
- University of Otagao, Business School, New Zealand
- University of Minho, Portugal
- University de Los Andes, Venezuela
- Indian Institute of Science, Bangalore [not yet guaranteed 24/7 because of development work]

To access all registered IRs, use :

A final thought – as all working researchers know, access to any single article may be the key to a major breakthrough, so counting downloads (or even citations) can never reflect the true impact that IRs have on research – but IRs – along with open access journals – open doors that were previously closed to all but a few.

Posted by Barbara Kirsop, with many thanks to IR managers who provided details of their statistics management procedures.

Tuesday, 4 August 2009

The chain of communication in health science

A recent issue of the WHO Bulletin is focussed on communication in health information. It contains a Round Table discussion on the role of open access in facilitating the exchange of essential health-related knowledge. The base paper for this discussion by three EPT Trustees (Chan, Arunachalam and Kirsop) is discussed in contributions from Alma Swan, Robert Terry and Scott Plutchak.

Read in connection with the broadband news for southern Africa reported below, greater opportunities for meeting the many health problems faced by the developing world are now becoming a reality.

South and East Africa get faster telecommunications links

The monthly e-newsletter of the Southern African NGO Network (SANGONeT )has announced the following good news: "The much-anticipated Seacom undersea fibre optic cable was finally launched on 23 July 2009 during simultaneous events in South Africa, Tanzania, Kenya, Uganda and Mozambique. The 17 000 kilometere, 1,28 Terabytes per second (Tb/s) cable links south and east Africa to global telecommunications networks via India and Europe. It represents the dawn of a new era for broadband connectivity in Africa with the potential to significantly impact on the future growth and development of the continent."

While much remains to be done in terms of regulatory and policy issues, this is a major step forward for all consituencies able to benefit from online access to global information, including of course research findings available to all academic communties through open access resources.

Monday, 20 July 2009

OA developments in CIS countries and South Africa

eIFL.net, with the help of the Open Society Institute, continues to make steady progress in the CIS (Commonwealth of Independent States) countries and in other eIFL countries with regard to open access and policy developments. The recent eIFL Newsletter highlights a number of major developments:
- A new Lithuanian law on science requires online access for publicly-funded research took effect on May 12, 2009 and was made possible through the commitment and hard work of the Lithuanian Research Library Consortium;
- In Poland, Krzysztof Gulda, Director of the Department of Strategy and Development of Science at the Ministry of Science and Higher Education, speaking at the conference Open Educational Resources in Poland on April 23, declared the interest of the Ministry in introducing open science models in Poland, as part of the current reform of the scientific system. In particular, he declared that the Ministry is considering introducing an open mandate for publicly funded scientific content;
- Implementation of the Belgorod Declaration on open access to scientific knowledge and cultural heritage was endorsed by 10 rectors in Belarus, the Russian Federation and Ukraine. And on May 28 Belgorod State University presented its digital repository (dspace.bsu.edu.ru) followed by the V.N. Karazin Kharkiv National University launching its digital repository eKhNUIR (dspace.univer.kharkov.ua) to implement the action plan of the Belgorod declaration on open access to scientific knowledge and cultural heritage at the university area of border regions of Belarus, the Russian Federation and Ukraine for 2008-2013;
- In Ukraine, libraries advocated open access and the implementation of the national open access mandate and a new thematic digital repository –the Central and Eastern European Marine Repository. More than 150 Ukrainian University librarians endorsed the Open Access to knowledge statement on May 21 at the International conference “Libraries of the higher education institutions in the context of higher education modernisation” that took place in Sevastopol, Ukraine.
To implement the Open Access Mandate (open access to research funded from the state budget of Ukraine introduced in the Law of Ukraine On the principles of Developing Information Society in Ukraine in 2007-2015) the Vernadsky National library of Ukraine created a registry of 726 journals. Full text articles of 346 journals (starting from 2008) are already deposited here.
And the library of the Institute of Biology of the Southern Seas (IBSS), Ukraine, launched CEEMaR (Central and Eastern European Marine Repository) – a thematic digital repository covering the marine, brackish and freshwater environments and providing access to papers produced by the staff of the ECET institutes in Bulgaria, Poland, Russia and Ukraine;
- And in South Africa, the first African open access institutional mandate at the University of Pretoria and a new repository at the Cape Peninsula University of Technology was registered. On May 22, Monica Hammes registered the first African open access mandate of the University of Pretoria, South Africa: www.eprints.org/openaccess.

More information about all these developments is available from
eIFL-OA

Sunday, 12 July 2009

From research to treatment

A child is dying of malaria in an African village. Medication available is minimal. Of what possible use is the most recent research being carried out in a distant university or research institute when what is needed is immediate and appropriate health care?

Yet, without past research we would not know about the antimalarial activities of peptide antibiotics isolated from fungi, as reported by Nagaraj, Uma, Shivayogi and Balaram in an American Society of Microbiology publication, and freely available from the Indian Institute of Science’s repository. We would not know about a recent study on the role of rapid diagnostic tests in managing malaria, published in PLoS Medicine. Nothing would emerge to improve the treatment of malaria in the future.

There is a chain of communication in health knowledge, stretching from the primary research publication, through the development and application, through publications that ‘translate’ the knowledge appropriately for health care workers and on to the treatment of those in need. This is discussed in a recent publication by three EPT Trustees, Chan, Arunachalam and Kirsop, in the Open Medicine journal. The authors argue that if the first link in the chain is broken, the development of essential new treatments will not take place. They show that free and open access to the latest research findings is critical for the exchange and sharing of research findings that will accelerate new treatments.

The Open Medicine journal is a non-profit open access journal that encourages the free use of published reports and data. Its mission is to ‘facilitate the equitable global dissemination of high-quality health research within the health community; to promote international dialogue and collaboration on health issues; to improve clinical practice; and to expand and deepen the understanding of health and health care’.